Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC27.34■■□□□ 1.97
CDC42BPBQ9Y5S2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CDC42BPBQ9Y5S2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDC42BPBQ9Y5S2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC27.34■■□□□ 1.97
CDC42BPBQ9Y5S2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC27.34■■□□□ 1.97
CDC42BPBQ9Y5S2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC27.34■■□□□ 1.97
CDC42BPBQ9Y5S2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
CDC42BPBQ9Y5S2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC27.34■■□□□ 1.97
CDC42BPBQ9Y5S2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CDC42BPBQ9Y5S2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 AC122714.2-201ENST00000502787 707 ntBASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 AC006557.2-201ENST00000592985 1240 ntBASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 MIR1199-201ENST00000621445 119 ntBASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
CDC42BPBQ9Y5S2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC27.33■■□□□ 1.96
CDC42BPBQ9Y5S2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC27.33■■□□□ 1.96
CDC42BPBQ9Y5S2 METTL21AP1-201ENST00000438852 635 ntBASIC27.33■■□□□ 1.96
CDC42BPBQ9Y5S2 AC136632.2-201ENST00000512891 861 ntBASIC27.33■■□□□ 1.96
CDC42BPBQ9Y5S2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC27.33■■□□□ 1.96
CDC42BPBQ9Y5S2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPBQ9Y5S2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC27.32■■□□□ 1.96
CDC42BPBQ9Y5S2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPBQ9Y5S2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPBQ9Y5S2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC27.32■■□□□ 1.96
CDC42BPBQ9Y5S2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPBQ9Y5S2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC42BPBQ9Y5S2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC27.32■■□□□ 1.96
CDC42BPBQ9Y5S2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC27.32■■□□□ 1.96
CDC42BPBQ9Y5S2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC27.32■■□□□ 1.96
CDC42BPBQ9Y5S2 AC005332.7-201ENST00000614046 2005 ntBASIC27.32■■□□□ 1.96
CDC42BPBQ9Y5S2 AC093010.1-201ENST00000473625 1624 ntBASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 KRT18P2-201ENST00000447938 1258 ntBASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 AC108073.2-201ENST00000464002 357 ntBASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 YBX1P5-201ENST00000509441 847 ntBASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CDC42BPBQ9Y5S2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 MCCD1P2-201ENST00000423228 335 ntBASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 AL022326.1-202ENST00000641533 845 ntBASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC42BPBQ9Y5S2 ESPNP-201ENST00000270691 2015 ntBASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 SPDYE21P-201ENST00000413323 827 ntBASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDC42BPBQ9Y5S2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms