Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 AC010240.3-201ENST00000607688 395 ntBASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 AC106820.2-201ENST00000563775 3264 ntBASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA11Q9Y5H2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
PCDHGA11Q9Y5H2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA11Q9Y5H2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA11Q9Y5H2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 AC145285.6-201ENST00000604632 637 ntBASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA11Q9Y5H2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 AC087499.1-201ENST00000418141 1075 ntBASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 SEC1P-202ENST00000473944 940 ntBASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 AC099343.3-201ENST00000605834 2503 ntBASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA11Q9Y5H2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGA11Q9Y5H2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms