Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC091917.2-201ENST00000505002 744 ntBASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 ZNF444P1-201ENST00000559497 298 ntBASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 AC012313.10-201ENST00000623509 926 ntBASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 AC068587.9-201ENST00000641814 219 ntBASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 BCL2-203ENST00000589955 5011 ntBASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 HEIH-201ENST00000623091 1652 ntBASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGA4Q9Y5G9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDHGA4Q9Y5G9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 AL109659.2-201ENST00000606809 1674 ntBASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 MCCD1P1-208ENST00000445732 328 ntBASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 MIR3908-201ENST00000579798 126 ntBASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDHGA4Q9Y5G9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGA4Q9Y5G9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.96■□□□□ 0.46
PCDHGA4Q9Y5G9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHGA4Q9Y5G9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGA4Q9Y5G9 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms