Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB3Q9Y5G1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB3Q9Y5G1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB3Q9Y5G1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB3Q9Y5G1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB3Q9Y5G1 AC011270.2-201ENST00000624293 2550 ntBASIC17.29■□□□□ 0.36
PCDHGB3Q9Y5G1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGB3Q9Y5G1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGB3Q9Y5G1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 MYLKP1-201ENST00000509077 1580 ntBASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 AL023803.3-201ENST00000615559 522 ntBASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 GNAS-203ENST00000306120 1878 ntBASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 FZD10-202ENST00000539839 3282 ntBASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB3Q9Y5G1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 ATP5G1P1-201ENST00000448724 379 ntBASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDHGB3Q9Y5G1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDHGB3Q9Y5G1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PCDHGB3Q9Y5G1 KRT8P7-201ENST00000533003 1432 ntBASIC17.27■□□□□ 0.35
PCDHGB3Q9Y5G1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB3Q9Y5G1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDHGB3Q9Y5G1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB3Q9Y5G1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGB3Q9Y5G1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.27■□□□□ 0.35
PCDHGB3Q9Y5G1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGB3Q9Y5G1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms