Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 KRT18P31-201ENST00000506277 1292 ntBASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 UNC93B7-201ENST00000509439 705 ntBASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 RN7SL510P-201ENST00000581311 263 ntBASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 LINC01711-201ENST00000598340 967 ntBASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 IFNL4P1-201ENST00000607083 540 ntBASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 AC009154.2-201ENST00000621177 724 ntBASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00588Q9Y4M8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 ESPNP-201ENST00000270691 2015 ntBASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 AC068472.1-201ENST00000474589 881 ntBASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 BX323043.1-201ENST00000641006 1765 ntBASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 AC098818.2-201ENST00000564925 2320 ntBASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00588Q9Y4M8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00588Q9Y4M8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00588Q9Y4M8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00588Q9Y4M8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00588Q9Y4M8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00588Q9Y4M8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00588Q9Y4M8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LINC00588Q9Y4M8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00588Q9Y4M8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC00588Q9Y4M8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC00588Q9Y4M8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms