Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UBE2D4Q9Y2X8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 AC009102.3-201ENST00000623118 1491 ntBASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 SDHAP2-201ENST00000455183 2001 ntBASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 AL353807.1-201ENST00000427475 662 ntBASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 AC130371.2-201ENST00000619443 611 ntBASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 AL023806.1-201ENST00000603994 1649 ntBASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UBE2D4Q9Y2X8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 AC093010.1-201ENST00000473625 1624 ntBASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 MIR149-201ENST00000384879 89 ntBASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 RNA5SP413-201ENST00000516373 109 ntBASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 GPAT2P1-201ENST00000444924 1672 ntBASIC12.67□□□□□ -0.38
UBE2D4Q9Y2X8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 AC099343.3-201ENST00000605834 2503 ntBASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.66□□□□□ -0.38
UBE2D4Q9Y2X8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms