Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 LINC01521-201ENST00000504184 1943 ntBASIC7.4□□□□□ -1.23
MACF1Q9UPN3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 AC108725.1-201ENST00000495472 409 ntBASIC7.4□□□□□ -1.23
MACF1Q9UPN3 AC097493.3-201ENST00000509725 367 ntBASIC7.4□□□□□ -1.23
MACF1Q9UPN3 AC112191.1-201ENST00000523689 701 ntBASIC7.4□□□□□ -1.23
MACF1Q9UPN3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC7.4□□□□□ -1.23
MACF1Q9UPN3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 TSSK5P-201ENST00000423978 907 ntBASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AC104390.1-201ENST00000555663 520 ntBASIC7.39□□□□□ -1.23
MACF1Q9UPN3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AC023141.13-201ENST00000604991 943 ntBASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AC128714.1-201ENST00000637035 887 ntBASIC7.39□□□□□ -1.23
MACF1Q9UPN3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AC234783.1-201ENST00000441761 496 ntBASIC7.39□□□□□ -1.23
MACF1Q9UPN3 PPP6R2P1-201ENST00000450880 1275 ntBASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 API5-211ENST00000534695 560 ntTSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AC005237.2-201ENST00000434368 219 ntBASIC7.39□□□□□ -1.23
MACF1Q9UPN3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 SPDYE7P-202ENST00000420373 878 ntBASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 AL138828.2-201ENST00000615812 383 ntBASIC7.39□□□□□ -1.23
MACF1Q9UPN3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MACF1Q9UPN3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 AC020928.2-201ENST00000588717 2197 ntBASIC7.38□□□□□ -1.23
MACF1Q9UPN3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 RPS2P36-201ENST00000456516 831 ntBASIC7.38□□□□□ -1.23
MACF1Q9UPN3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 AC068137.2-201ENST00000605408 478 ntBASIC7.38□□□□□ -1.23
MACF1Q9UPN3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
MACF1Q9UPN3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms