Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGC3Q9UN70 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 VENTXP5-201ENST00000523979 775 ntBASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 KRT18P55-202ENST00000578578 1546 ntBASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGC3Q9UN70 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 IGHGP-201ENST00000390555 1178 ntBASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 AL671277.2-201ENST00000458060 996 ntBASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 ZNF444P1-201ENST00000559497 298 ntBASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGC3Q9UN70 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 AP003733.1-201ENST00000491725 852 ntBASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 AC004263.2-201ENST00000617183 678 ntBASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGC3Q9UN70 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGC3Q9UN70 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGC3Q9UN70 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGC3Q9UN70 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGC3Q9UN70 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms