Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
DDX41Q9UJV9 PRORSD1P-202ENST00000563365 2154 ntBASIC20.9■□□□□ 0.94
DDX41Q9UJV9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 CHCHD2P8-201ENST00000429873 447 ntBASIC20.9■□□□□ 0.94
DDX41Q9UJV9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 AP002414.4-201ENST00000589764 1148 ntBASIC20.9■□□□□ 0.94
DDX41Q9UJV9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 AC090164.3-201ENST00000610780 2143 ntBASIC20.9■□□□□ 0.94
DDX41Q9UJV9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX41Q9UJV9 HEIH-201ENST00000623091 1652 ntBASIC20.89■□□□□ 0.94
DDX41Q9UJV9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX41Q9UJV9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 MIR3652-201ENST00000579335 131 ntBASIC20.89■□□□□ 0.93
DDX41Q9UJV9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 Z98044.1-201ENST00000632503 1764 ntBASIC20.89■□□□□ 0.93
DDX41Q9UJV9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
DDX41Q9UJV9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 AL357033.4-201ENST00000617703 1807 ntBASIC20.88■□□□□ 0.93
DDX41Q9UJV9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.88■□□□□ 0.93
DDX41Q9UJV9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.87■□□□□ 0.93
DDX41Q9UJV9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DDX41Q9UJV9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms