Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBP1Q9NZI7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 YBX1P2-201ENST00000489612 999 ntBASIC18.54■□□□□ 0.56
UBP1Q9NZI7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBP1Q9NZI7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 BX664615.1-201ENST00000443558 458 ntBASIC18.53■□□□□ 0.56
UBP1Q9NZI7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBP1Q9NZI7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 AC006011.2-201ENST00000621313 1158 ntBASIC18.52■□□□□ 0.56
UBP1Q9NZI7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBP1Q9NZI7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBP1Q9NZI7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms