Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 DGCR10-201ENST00000609839 495 ntBASIC16.45■□□□□ 0.22
HINT3Q9NQE9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 AC006116.8-202ENST00000587620 1550 ntBASIC16.45■□□□□ 0.22
HINT3Q9NQE9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HINT3Q9NQE9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 AP000525.1-201ENST00000608286 694 ntBASIC16.44■□□□□ 0.22
HINT3Q9NQE9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HINT3Q9NQE9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 MMP23A-201ENST00000234610 1017 ntBASIC16.43■□□□□ 0.22
HINT3Q9NQE9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 AL163051.1-201ENST00000569214 1512 ntBASIC16.43■□□□□ 0.22
HINT3Q9NQE9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.43■□□□□ 0.22
HINT3Q9NQE9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 AC009102.3-201ENST00000623118 1491 ntBASIC16.42■□□□□ 0.22
HINT3Q9NQE9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HINT3Q9NQE9 SIRPAP1-201ENST00000448467 1770 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms