Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A4Q9HBG4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 AC111152.3-201ENST00000569699 673 ntBASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP6V0A4Q9HBG4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 ESPNP-201ENST00000270691 2015 ntBASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 RN7SL510P-201ENST00000581311 263 ntBASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.17■□□□□ 0.82
ATP6V0A4Q9HBG4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 NUS1P1-201ENST00000446295 882 ntBASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATP6V0A4Q9HBG4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms