Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 KRT8P26-201ENST00000534154 1276 ntBASIC18■□□□□ 0.47
POLR1BQ9H9Y6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 AP002414.4-201ENST00000589764 1148 ntBASIC18■□□□□ 0.47
POLR1BQ9H9Y6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18■□□□□ 0.47
POLR1BQ9H9Y6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 AL354751.1-201ENST00000412768 1863 ntBASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 PVRIG2P-201ENST00000435460 978 ntBASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR1BQ9H9Y6 WIZP1-201ENST00000531444 2299 ntBASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 CHCHD2P8-201ENST00000429873 447 ntBASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 AL162741.1-201ENST00000565563 1558 ntBASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 BICD1-207ENST00000551848 1962 ntBASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 AC006333.2-201ENST00000607957 2099 ntBASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.98■□□□□ 0.47
POLR1BQ9H9Y6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms