Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.82■□□□□ 0.76
HIPK3Q9H422 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.82■□□□□ 0.76
HIPK3Q9H422 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HIPK3Q9H422 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HIPK3Q9H422 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.82■□□□□ 0.76
HIPK3Q9H422 AC134684.3-201ENST00000641758 218 ntBASIC19.82■□□□□ 0.76
HIPK3Q9H422 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIPK3Q9H422 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIPK3Q9H422 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.82■□□□□ 0.76
HIPK3Q9H422 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIPK3Q9H422 MYLKP1-201ENST00000509077 1580 ntBASIC19.82■□□□□ 0.76
HIPK3Q9H422 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIPK3Q9H422 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 AC007967.2-201ENST00000432613 625 ntBASIC19.81■□□□□ 0.76
HIPK3Q9H422 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
HIPK3Q9H422 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HIPK3Q9H422 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK3Q9H422 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK3Q9H422 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.8■□□□□ 0.76
HIPK3Q9H422 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.8■□□□□ 0.76
HIPK3Q9H422 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.8■□□□□ 0.76
HIPK3Q9H422 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK3Q9H422 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK3Q9H422 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.8■□□□□ 0.76
HIPK3Q9H422 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK3Q9H422 AC004832.2-201ENST00000426397 482 ntBASIC19.8■□□□□ 0.76
HIPK3Q9H422 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.8■□□□□ 0.76
HIPK3Q9H422 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.8■□□□□ 0.76
HIPK3Q9H422 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.8■□□□□ 0.76
HIPK3Q9H422 AC002347.1-201ENST00000569543 541 ntBASIC19.8■□□□□ 0.76
HIPK3Q9H422 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.8■□□□□ 0.76
HIPK3Q9H422 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.8■□□□□ 0.76
HIPK3Q9H422 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK3Q9H422 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK3Q9H422 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK3Q9H422 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK3Q9H422 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HIPK3Q9H422 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 KRT18P65-201ENST00000439811 1286 ntBASIC19.79■□□□□ 0.76
HIPK3Q9H422 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 LINC02084-201ENST00000606069 1096 ntBASIC19.79■□□□□ 0.76
HIPK3Q9H422 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HIPK3Q9H422 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HIPK3Q9H422 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms