Protein–RNA interactions for Protein: Q9H3W5

LRRN3, Leucine-rich repeat neuronal protein 3, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRN3Q9H3W5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRN3Q9H3W5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRN3Q9H3W5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRRN3Q9H3W5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRN3Q9H3W5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRN3Q9H3W5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LRRN3Q9H3W5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRN3Q9H3W5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 REXO1L6P-202ENST00000619970 1078 ntBASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRN3Q9H3W5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.58■□□□□ 0.41
LRRN3Q9H3W5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.58■□□□□ 0.41
LRRN3Q9H3W5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.58■□□□□ 0.41
LRRN3Q9H3W5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRN3Q9H3W5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 AC113404.2-201ENST00000507884 177 ntBASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 AC079776.4-201ENST00000511039 504 ntBASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRN3Q9H3W5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 MRPL3P1-201ENST00000400109 1033 ntBASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 AL022342.1-201ENST00000400363 863 ntBASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
LRRN3Q9H3W5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms