Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 AP000997.3-201ENST00000623333 2250 ntBASIC19.18■□□□□ 0.66
LHX5Q9H2C1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 NOC2LP2-201ENST00000407594 1944 ntBASIC19.17■□□□□ 0.66
LHX5Q9H2C1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 UPK3BP1-201ENST00000428678 509 ntBASIC19.17■□□□□ 0.66
LHX5Q9H2C1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.17■□□□□ 0.66
LHX5Q9H2C1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LHX5Q9H2C1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 SPDYE13P-201ENST00000445314 798 ntBASIC19.16■□□□□ 0.66
LHX5Q9H2C1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 ZNF444P1-201ENST00000559497 298 ntBASIC19.16■□□□□ 0.66
LHX5Q9H2C1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 AC083849.1-201ENST00000615227 514 ntBASIC19.16■□□□□ 0.66
LHX5Q9H2C1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 AC008764.6-201ENST00000595909 2069 ntBASIC19.16■□□□□ 0.66
LHX5Q9H2C1 LINC00602-201ENST00000629776 2065 ntBASIC19.16■□□□□ 0.66
LHX5Q9H2C1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX5Q9H2C1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 IGHGP-201ENST00000390555 1178 ntBASIC19.15■□□□□ 0.66
LHX5Q9H2C1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 AL671277.2-201ENST00000458060 996 ntBASIC19.15■□□□□ 0.66
LHX5Q9H2C1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
LHX5Q9H2C1 AL121956.5-201ENST00000625261 221 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms