Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 FAM207BP-201ENST00000447172 505 ntBASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXP3Q9BZS1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 INGX-201ENST00000359239 846 ntBASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 EGLN1P1-201ENST00000531623 762 ntBASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXP3Q9BZS1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 KRT8P50-201ENST00000562022 1438 ntBASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 AC087388.1-201ENST00000571370 1112 ntBASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
FOXP3Q9BZS1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
FOXP3Q9BZS1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXP3Q9BZS1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.77■□□□□ 0.59
FOXP3Q9BZS1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
FOXP3Q9BZS1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXP3Q9BZS1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXP3Q9BZS1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXP3Q9BZS1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXP3Q9BZS1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 AC012317.2-201ENST00000623305 2251 ntBASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 TSPY14P-201ENST00000303979 915 ntBASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 AC008040.2-201ENST00000461049 708 ntBASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXP3Q9BZS1 WWOX-216ENST00000569818 525 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms