Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
UPF3BQ9BZI7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
UPF3BQ9BZI7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 KRT18P35-201ENST00000510488 1269 ntBASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 AC024243.1-201ENST00000609234 778 ntBASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 AC012306.2-201ENST00000609350 630 ntBASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 LINC00896-202ENST00000609602 2128 ntBASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
UPF3BQ9BZI7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 SEC1P-202ENST00000473944 940 ntBASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 AC010240.3-201ENST00000607688 395 ntBASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 AL590326.2-201ENST00000625139 305 ntBASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UPF3BQ9BZI7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 AC093010.1-201ENST00000473625 1624 ntBASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UPF3BQ9BZI7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
UPF3BQ9BZI7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
UPF3BQ9BZI7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
UPF3BQ9BZI7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UPF3BQ9BZI7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms