Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.1■□□□□ 0.33
CPPED1Q9BRF8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 AC009065.1-201ENST00000564055 1225 ntBASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPPED1Q9BRF8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CPPED1Q9BRF8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPPED1Q9BRF8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPPED1Q9BRF8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPPED1Q9BRF8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.08■□□□□ 0.33
CPPED1Q9BRF8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPPED1Q9BRF8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.08■□□□□ 0.33
CPPED1Q9BRF8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPPED1Q9BRF8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPPED1Q9BRF8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPPED1Q9BRF8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPPED1Q9BRF8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 AC012618.2-201ENST00000428058 849 ntBASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 AC104390.1-201ENST00000555663 520 ntBASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPPED1Q9BRF8 AC012313.1-201ENST00000593393 3059 ntBASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 SLC25A1P2-201ENST00000430693 912 ntBASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 FAM201B-201ENST00000458407 597 ntBASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 DUTP2-201ENST00000519164 463 ntBASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 AL353719.1-201ENST00000566847 864 ntBASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 MIR3180-4-201ENST00000582223 153 ntBASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 AC233702.5-201ENST00000584107 538 ntBASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 AL049637.2-201ENST00000641778 930 ntBASIC17.07■□□□□ 0.32
CPPED1Q9BRF8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms