Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 MIR1233-2-201ENST00000408138 82 ntBASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 MIR1233-1-201ENST00000408722 82 ntBASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 AC018712.1-201ENST00000455767 687 ntBASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 RPL13AP23-201ENST00000480739 586 ntBASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 AC139887.3-201ENST00000568585 713 ntBASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 TERC-201ENST00000602385 541 ntBASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 TNXA-203ENST00000507684 2038 ntBASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 AC243591.1-201ENST00000452967 1364 ntBASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC46A1Q96NT5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 AL357033.4-201ENST00000617703 1807 ntBASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 CROCCP3-202ENST00000420820 1947 ntBASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 KRT8P50-201ENST00000562022 1438 ntBASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC46A1Q96NT5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 AL031598.1-201ENST00000561511 1773 ntBASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 AL355877.3-201ENST00000622820 899 ntBASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SLC46A1Q96NT5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC46A1Q96NT5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.33■□□□□ 0.37
SLC46A1Q96NT5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SLC46A1Q96NT5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC46A1Q96NT5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC46A1Q96NT5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC46A1Q96NT5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC46A1Q96NT5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC46A1Q96NT5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC46A1Q96NT5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC46A1Q96NT5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms