Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 PRSS44-201ENST00000515154 1146 ntBASIC13.92□□□□□ -0.18
LINC00479Q96M42 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.92□□□□□ -0.18
LINC00479Q96M42 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00479Q96M42 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC00479Q96M42 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 UBALD1-205ENST00000590891 2641 ntBASIC13.91□□□□□ -0.18
LINC00479Q96M42 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 AC006970.2-201ENST00000450065 779 ntBASIC13.91□□□□□ -0.18
LINC00479Q96M42 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 UNC93B4-201ENST00000505679 747 ntBASIC13.91□□□□□ -0.18
LINC00479Q96M42 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 KRT18P41-201ENST00000518924 1277 ntBASIC13.91□□□□□ -0.18
LINC00479Q96M42 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 AC018695.7-201ENST00000624587 2492 ntBASIC13.91□□□□□ -0.18
LINC00479Q96M42 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00479Q96M42 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00479Q96M42 LINC00602-201ENST00000629776 2065 ntBASIC13.91□□□□□ -0.18
LINC00479Q96M42 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms