Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 AC106795.1-205ENST00000512851 1056 ntBASIC21.15■□□□□ 0.98
CCDC17Q96LX7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 INTS4P1-201ENST00000438455 1935 ntBASIC21.15■□□□□ 0.98
CCDC17Q96LX7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC17Q96LX7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC17Q96LX7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.98
CCDC17Q96LX7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC17Q96LX7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC17Q96LX7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC17Q96LX7 AC018445.3-201ENST00000624177 1945 ntBASIC21.14■□□□□ 0.98
CCDC17Q96LX7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.14■□□□□ 0.97
CCDC17Q96LX7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC17Q96LX7 AC132008.2-207ENST00000454517 770 ntBASIC21.14■□□□□ 0.97
CCDC17Q96LX7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.14■□□□□ 0.97
CCDC17Q96LX7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.14■□□□□ 0.97
CCDC17Q96LX7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC17Q96LX7 PHGDH-209ENST00000641074 1780 ntBASIC21.14■□□□□ 0.97
CCDC17Q96LX7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC17Q96LX7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC17Q96LX7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC17Q96LX7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC17Q96LX7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC17Q96LX7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 AL662844.1-201ENST00000546340 181 ntBASIC21.13■□□□□ 0.97
CCDC17Q96LX7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC17Q96LX7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 AC097374.2-201ENST00000618617 1306 ntBASIC21.12■□□□□ 0.97
CCDC17Q96LX7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 DUTP2-201ENST00000519164 463 ntBASIC21.12■□□□□ 0.97
CCDC17Q96LX7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC17Q96LX7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 SLC25A6P4-201ENST00000586535 553 ntBASIC21.11■□□□□ 0.97
CCDC17Q96LX7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC17Q96LX7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms