Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX27Q96L92 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX27Q96L92 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SNX27Q96L92 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SNX27Q96L92 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX27Q96L92 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SNX27Q96L92 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.56■□□□□ 0.72
SNX27Q96L92 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.56■□□□□ 0.72
SNX27Q96L92 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.56■□□□□ 0.72
SNX27Q96L92 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SNX27Q96L92 MIR3197-201ENST00000582241 73 ntBASIC19.56■□□□□ 0.72
SNX27Q96L92 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
SNX27Q96L92 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SNX27Q96L92 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SNX27Q96L92 PHGDH-209ENST00000641074 1780 ntBASIC19.56■□□□□ 0.72
SNX27Q96L92 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX27Q96L92 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX27Q96L92 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX27Q96L92 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX27Q96L92 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX27Q96L92 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX27Q96L92 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
SNX27Q96L92 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX27Q96L92 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SNX27Q96L92 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
SNX27Q96L92 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX27Q96L92 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SNX27Q96L92 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX27Q96L92 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SNX27Q96L92 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX27Q96L92 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX27Q96L92 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.55■□□□□ 0.72
SNX27Q96L92 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX27Q96L92 TSPY19P-201ENST00000418461 509 ntBASIC19.55■□□□□ 0.72
SNX27Q96L92 TSPY18P-201ENST00000441642 509 ntBASIC19.55■□□□□ 0.72
SNX27Q96L92 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.55■□□□□ 0.72
SNX27Q96L92 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.55■□□□□ 0.72
SNX27Q96L92 FOSL1P1-201ENST00000511041 816 ntBASIC19.55■□□□□ 0.72
SNX27Q96L92 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX27Q96L92 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX27Q96L92 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX27Q96L92 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.55■□□□□ 0.72
SNX27Q96L92 AC099336.1-202ENST00000602961 463 ntBASIC19.55■□□□□ 0.72
SNX27Q96L92 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX27Q96L92 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX27Q96L92 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX27Q96L92 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX27Q96L92 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX27Q96L92 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX27Q96L92 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX27Q96L92 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX27Q96L92 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX27Q96L92 AC093010.1-201ENST00000473625 1624 ntBASIC19.54■□□□□ 0.72
SNX27Q96L92 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SNX27Q96L92 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX27Q96L92 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SNX27Q96L92 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SNX27Q96L92 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SNX27Q96L92 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX27Q96L92 AC004408.2-201ENST00000623613 2777 ntBASIC19.54■□□□□ 0.72
SNX27Q96L92 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX27Q96L92 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SNX27Q96L92 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.54■□□□□ 0.72
SNX27Q96L92 HTR5BP-201ENST00000430851 1154 ntBASIC19.54■□□□□ 0.72
SNX27Q96L92 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 MTCL1P1-201ENST00000446207 792 ntBASIC19.54■□□□□ 0.72
SNX27Q96L92 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SNX27Q96L92 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SNX27Q96L92 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SNX27Q96L92 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.54■□□□□ 0.72
SNX27Q96L92 AC138894.3-201ENST00000603787 634 ntBASIC19.54■□□□□ 0.72
SNX27Q96L92 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX27Q96L92 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX27Q96L92 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SNX27Q96L92 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX27Q96L92 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX27Q96L92 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX27Q96L92 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX27Q96L92 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX27Q96L92 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX27Q96L92 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms