Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 MYLKP1-201ENST00000509077 1580 ntBASIC19.66■□□□□ 0.74
TRIM43Q96BQ3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 AC018845.2-201ENST00000568326 409 ntBASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 AL078644.1-201ENST00000609881 752 ntBASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM43Q96BQ3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM43Q96BQ3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM43Q96BQ3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM43Q96BQ3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TRIM43Q96BQ3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.64■□□□□ 0.74
TRIM43Q96BQ3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 PRYP5-201ENST00000451909 266 ntBASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 AC011467.4-201ENST00000594891 528 ntBASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 AC239800.4-201ENST00000603712 296 ntBASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM43Q96BQ3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 CRYGEP-201ENST00000412192 528 ntBASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 ELL2P1-201ENST00000413990 1906 ntBASIC19.63■□□□□ 0.73
TRIM43Q96BQ3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 CEND1P1-201ENST00000451006 455 ntBASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 COX20P2-201ENST00000452636 358 ntBASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 SPCS2P1-201ENST00000561636 679 ntBASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 AC027612.4-201ENST00000605371 583 ntBASIC19.62■□□□□ 0.73
TRIM43Q96BQ3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms