Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC23.18■■□□□ 1.3
SMARCC1Q92922 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC1Q92922 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC1Q92922 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCC1Q92922 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SMARCC1Q92922 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
SMARCC1Q92922 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCC1Q92922 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC23.17■■□□□ 1.3
SMARCC1Q92922 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SMARCC1Q92922 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC23.17■■□□□ 1.3
SMARCC1Q92922 MIR1199-201ENST00000621445 119 ntBASIC23.17■■□□□ 1.3
SMARCC1Q92922 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC23.17■■□□□ 1.3
SMARCC1Q92922 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCC1Q92922 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCC1Q92922 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCC1Q92922 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCC1Q92922 AL161938.1-201ENST00000569833 2180 ntBASIC23.17■■□□□ 1.3
SMARCC1Q92922 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SMARCC1Q92922 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC1Q92922 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC1Q92922 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC1Q92922 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC1Q92922 AC023274.1-201ENST00000418278 595 ntBASIC23.16■■□□□ 1.3
SMARCC1Q92922 KRT18P27-201ENST00000427733 1299 ntBASIC23.16■■□□□ 1.3
SMARCC1Q92922 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC1Q92922 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC1Q92922 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SMARCC1Q92922 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC1Q92922 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC1Q92922 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMARCC1Q92922 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC1Q92922 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC1Q92922 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SMARCC1Q92922 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC1Q92922 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC1Q92922 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.15■■□□□ 1.3
SMARCC1Q92922 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC1Q92922 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC1Q92922 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC1Q92922 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC1Q92922 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SMARCC1Q92922 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SMARCC1Q92922 DNAJB3-202ENST00000449667 1266 ntBASIC23.15■■□□□ 1.3
SMARCC1Q92922 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SMARCC1Q92922 ETFA-208ENST00000559602 792 ntTSL 3 BASIC23.15■■□□□ 1.3
SMARCC1Q92922 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC1Q92922 CYGB-205ENST00000590175 830 ntTSL 3 BASIC23.15■■□□□ 1.3
SMARCC1Q92922 AC006557.2-201ENST00000592985 1240 ntBASIC23.15■■□□□ 1.3
SMARCC1Q92922 LINC02084-201ENST00000606069 1096 ntBASIC23.15■■□□□ 1.3
SMARCC1Q92922 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.15■■□□□ 1.3
SMARCC1Q92922 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SMARCC1Q92922 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC23.15■■□□□ 1.3
SMARCC1Q92922 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMARCC1Q92922 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SMARCC1Q92922 AC093484.2-201ENST00000580996 2166 ntBASIC23.14■■□□□ 1.3
SMARCC1Q92922 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.14■■□□□ 1.3
SMARCC1Q92922 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.14■■□□□ 1.3
SMARCC1Q92922 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SMARCC1Q92922 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.14■■□□□ 1.3
SMARCC1Q92922 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC23.14■■□□□ 1.3
SMARCC1Q92922 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SMARCC1Q92922 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC1Q92922 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC23.14■■□□□ 1.29
SMARCC1Q92922 AC007967.3-201ENST00000434308 558 ntBASIC23.14■■□□□ 1.29
SMARCC1Q92922 BX005266.1-201ENST00000473402 457 ntBASIC23.14■■□□□ 1.29
SMARCC1Q92922 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.14■■□□□ 1.29
SMARCC1Q92922 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
SMARCC1Q92922 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC23.14■■□□□ 1.29
SMARCC1Q92922 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC23.14■■□□□ 1.29
SMARCC1Q92922 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC23.14■■□□□ 1.29
SMARCC1Q92922 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.29
SMARCC1Q92922 AC073592.4-201ENST00000623827 446 ntBASIC23.14■■□□□ 1.29
SMARCC1Q92922 AC005593.1-201ENST00000624894 515 ntBASIC23.14■■□□□ 1.29
SMARCC1Q92922 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.14■■□□□ 1.29
SMARCC1Q92922 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMARCC1Q92922 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.14■■□□□ 1.29
SMARCC1Q92922 PCDHAC2-203ENST00000615316 3011 ntBASIC23.14■■□□□ 1.29
SMARCC1Q92922 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC23.14■■□□□ 1.29
SMARCC1Q92922 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC1Q92922 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMARCC1Q92922 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.13■■□□□ 1.29
SMARCC1Q92922 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms