Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CNIH3Q8TBE1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
CNIH3Q8TBE1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH3Q8TBE1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH3Q8TBE1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH3Q8TBE1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH3Q8TBE1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.64■□□□□ 0.25
CNIH3Q8TBE1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH3Q8TBE1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH3Q8TBE1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNIH3Q8TBE1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 MIR935-201ENST00000401179 91 ntBASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 CROCCP2-202ENST00000412962 2773 ntBASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
CNIH3Q8TBE1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 NBPF21P-201ENST00000425093 1451 ntBASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 AC046158.3-201ENST00000624947 2558 ntBASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNIH3Q8TBE1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNIH3Q8TBE1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CNIH3Q8TBE1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CNIH3Q8TBE1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.61■□□□□ 0.25
CNIH3Q8TBE1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNIH3Q8TBE1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNIH3Q8TBE1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms