Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 KRT18P31-201ENST00000506277 1292 ntBASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 AC120114.3-201ENST00000611923 658 ntBASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NKX2-3Q8TAU0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 AC007613.1-201ENST00000572811 2597 ntBASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 IGHGP-201ENST00000390555 1178 ntBASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.49■■□□□ 1.03
NKX2-3Q8TAU0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 DRAXINP1-201ENST00000437611 948 ntBASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 AC012615.1-201ENST00000565797 1299 ntBASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 AL671883.3-201ENST00000603274 991 ntBASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 AL121912.1-201ENST00000603683 238 ntBASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.48■■□□□ 1.03
NKX2-3Q8TAU0 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 AP000867.3-201ENST00000524675 377 ntBASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 GMCL1P1-201ENST00000463439 1581 ntBASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NKX2-3Q8TAU0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 AC091607.1-201ENST00000490318 1060 ntBASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 AP003733.1-201ENST00000491725 852 ntBASIC21.46■■□□□ 1.03
NKX2-3Q8TAU0 FOSL1P1-201ENST00000511041 816 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms