Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNIP1Q8TAD8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.12■□□□□ 0.33
SNIP1Q8TAD8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNIP1Q8TAD8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 AL356309.3-201ENST00000624132 1934 ntBASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 AC025062.2-201ENST00000605477 670 ntBASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 AL139288.1-201ENST00000623748 933 ntBASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.11■□□□□ 0.33
SNIP1Q8TAD8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 MTDHP5-201ENST00000598980 586 ntBASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 KRT8P50-201ENST00000562022 1438 ntBASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 FEM1AP3-201ENST00000403722 1741 ntBASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.1■□□□□ 0.33
SNIP1Q8TAD8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 AC211486.1-202ENST00000416371 468 ntBASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 AC068472.1-201ENST00000474589 881 ntBASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 AC211476.1-201ENST00000503899 468 ntBASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 UNC93B6-202ENST00000528242 690 ntBASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 AC105339.3-201ENST00000560043 636 ntBASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 AL138831.2-201ENST00000606564 490 ntBASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SNIP1Q8TAD8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms