Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 KRT18P41-201ENST00000518924 1277 ntBASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
RFWD2Q8NHY2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18■□□□□ 0.47
RFWD2Q8NHY2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFWD2Q8NHY2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RFWD2Q8NHY2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD2Q8NHY2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD2Q8NHY2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD2Q8NHY2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD2Q8NHY2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD2Q8NHY2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFWD2Q8NHY2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18■□□□□ 0.47
RFWD2Q8NHY2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RFWD2Q8NHY2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFWD2Q8NHY2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFWD2Q8NHY2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD2Q8NHY2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18■□□□□ 0.47
RFWD2Q8NHY2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18■□□□□ 0.47
RFWD2Q8NHY2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18■□□□□ 0.47
RFWD2Q8NHY2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RFWD2Q8NHY2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18■□□□□ 0.47
RFWD2Q8NHY2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RFWD2Q8NHY2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RFWD2Q8NHY2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 AP003097.1-201ENST00000530657 1135 ntBASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RFWD2Q8NHY2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 PRSS44-201ENST00000515154 1146 ntBASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RFWD2Q8NHY2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RFWD2Q8NHY2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFWD2Q8NHY2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RFWD2Q8NHY2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms