Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC28.29■■■□□ 2.12
CFAP43Q8NDM7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CFAP43Q8NDM7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC28.28■■■□□ 2.12
CFAP43Q8NDM7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CFAP43Q8NDM7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC28.28■■■□□ 2.12
CFAP43Q8NDM7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
CFAP43Q8NDM7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC28.28■■■□□ 2.12
CFAP43Q8NDM7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CFAP43Q8NDM7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC28.28■■■□□ 2.12
CFAP43Q8NDM7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC28.28■■■□□ 2.12
CFAP43Q8NDM7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CFAP43Q8NDM7 AC132938.6-201ENST00000623828 1655 ntBASIC28.28■■■□□ 2.12
CFAP43Q8NDM7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC28.27■■■□□ 2.12
CFAP43Q8NDM7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CFAP43Q8NDM7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CFAP43Q8NDM7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CFAP43Q8NDM7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC28.27■■■□□ 2.12
CFAP43Q8NDM7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CFAP43Q8NDM7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC28.27■■■□□ 2.12
CFAP43Q8NDM7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC28.27■■■□□ 2.12
CFAP43Q8NDM7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC28.27■■■□□ 2.12
CFAP43Q8NDM7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CFAP43Q8NDM7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.12
CFAP43Q8NDM7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
CFAP43Q8NDM7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
CFAP43Q8NDM7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
CFAP43Q8NDM7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
CFAP43Q8NDM7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC28.26■■■□□ 2.12
CFAP43Q8NDM7 ABCD1P5-201ENST00000445663 754 ntBASIC28.26■■■□□ 2.12
CFAP43Q8NDM7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC28.26■■■□□ 2.12
CFAP43Q8NDM7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC28.26■■■□□ 2.12
CFAP43Q8NDM7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC28.26■■■□□ 2.12
CFAP43Q8NDM7 AC126763.1-201ENST00000552015 2118 ntBASIC28.26■■■□□ 2.11
CFAP43Q8NDM7 KRT8P47-201ENST00000604727 1398 ntBASIC28.26■■■□□ 2.11
CFAP43Q8NDM7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP43Q8NDM7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP43Q8NDM7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC28.26■■■□□ 2.11
CFAP43Q8NDM7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP43Q8NDM7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC28.26■■■□□ 2.11
CFAP43Q8NDM7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CFAP43Q8NDM7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
CFAP43Q8NDM7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC28.26■■■□□ 2.11
CFAP43Q8NDM7 AC009154.2-201ENST00000621177 724 ntBASIC28.26■■■□□ 2.11
CFAP43Q8NDM7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 ESPNP-201ENST00000270691 2015 ntBASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 AC211486.1-202ENST00000416371 468 ntBASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 AC211476.1-201ENST00000503899 468 ntBASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 AC011467.2-201ENST00000598425 242 ntBASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CFAP43Q8NDM7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CFAP43Q8NDM7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CFAP43Q8NDM7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CFAP43Q8NDM7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
CFAP43Q8NDM7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
CFAP43Q8NDM7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CFAP43Q8NDM7 UNC93B6-202ENST00000528242 690 ntBASIC28.24■■■□□ 2.11
CFAP43Q8NDM7 AC009533.2-201ENST00000543664 586 ntBASIC28.24■■■□□ 2.11
CFAP43Q8NDM7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC28.24■■■□□ 2.11
CFAP43Q8NDM7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC28.24■■■□□ 2.11
CFAP43Q8NDM7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
CFAP43Q8NDM7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 KRT18P65-201ENST00000439811 1286 ntBASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CFAP43Q8NDM7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms