Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00311Q8N616 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00311Q8N616 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
LINC00311Q8N616 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
LINC00311Q8N616 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 KRT18P38-201ENST00000449496 1282 ntBASIC14.74□□□□□ -0.05
LINC00311Q8N616 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00311Q8N616 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00311Q8N616 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 KRT18P65-201ENST00000439811 1286 ntBASIC14.73□□□□□ -0.05
LINC00311Q8N616 AC112907.2-201ENST00000448639 330 ntBASIC14.73□□□□□ -0.05
LINC00311Q8N616 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 AC092597.1-201ENST00000487352 616 ntBASIC14.73□□□□□ -0.05
LINC00311Q8N616 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 RN7SL850P-201ENST00000579959 291 ntBASIC14.73□□□□□ -0.05
LINC00311Q8N616 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 HYMAI.1-201ENST00000620949 238 ntBASIC14.73□□□□□ -0.05
LINC00311Q8N616 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00311Q8N616 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00311Q8N616 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00311Q8N616 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LINC00311Q8N616 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.72□□□□□ -0.05
LINC00311Q8N616 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00311Q8N616 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC00311Q8N616 AP000997.3-201ENST00000623333 2250 ntBASIC14.72□□□□□ -0.05
LINC00311Q8N616 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC00311Q8N616 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms