Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 BICD1-207ENST00000551848 1962 ntBASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 AC233702.3-201ENST00000578656 1387 ntBASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.13■□□□□ 0.33
ARHGEF39Q8N4T4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 AC246785.2-201ENST00000432512 513 ntBASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 TOB2P1-201ENST00000469761 992 ntBASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.12■□□□□ 0.33
ARHGEF39Q8N4T4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 KRT18P56-201ENST00000507275 550 ntBASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.11■□□□□ 0.33
ARHGEF39Q8N4T4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 IGHV3-47-201ENST00000425060 335 ntBASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 MTCL1P1-201ENST00000446207 792 ntBASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.1■□□□□ 0.33
ARHGEF39Q8N4T4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms