Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 MIR770-201ENST00000390219 98 ntBASIC25.71■■□□□ 1.71
UBR1Q8IWV7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 AC004706.3-202ENST00000621574 984 ntBASIC25.71■■□□□ 1.71
UBR1Q8IWV7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
UBR1Q8IWV7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
UBR1Q8IWV7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
UBR1Q8IWV7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC25.7■■□□□ 1.71
UBR1Q8IWV7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
UBR1Q8IWV7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC25.7■■□□□ 1.71
UBR1Q8IWV7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
UBR1Q8IWV7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 AC010654.1-201ENST00000615722 808 ntBASIC25.7■■□□□ 1.7
UBR1Q8IWV7 AL589182.2-201ENST00000619332 1049 ntBASIC25.7■■□□□ 1.7
UBR1Q8IWV7 AC093028.1-201ENST00000622998 982 ntBASIC25.7■■□□□ 1.7
UBR1Q8IWV7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.7
UBR1Q8IWV7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 AC008667.4-201ENST00000607370 168 ntBASIC25.69■■□□□ 1.7
UBR1Q8IWV7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 AL049812.1-201ENST00000432563 2267 ntBASIC25.69■■□□□ 1.7
UBR1Q8IWV7 AL032819.2-201ENST00000624543 2162 ntBASIC25.69■■□□□ 1.7
UBR1Q8IWV7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
UBR1Q8IWV7 KLF4P1-201ENST00000412782 1185 ntBASIC25.68■■□□□ 1.7
UBR1Q8IWV7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 AL031432.2-201ENST00000566714 459 ntBASIC25.68■■□□□ 1.7
UBR1Q8IWV7 AL928711.1-201ENST00000570165 459 ntBASIC25.68■■□□□ 1.7
UBR1Q8IWV7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC25.68■■□□□ 1.7
UBR1Q8IWV7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBR1Q8IWV7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBR1Q8IWV7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
UBR1Q8IWV7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC25.67■■□□□ 1.7
UBR1Q8IWV7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBR1Q8IWV7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC25.67■■□□□ 1.7
UBR1Q8IWV7 AL139400.1-201ENST00000366220 510 ntBASIC25.67■■□□□ 1.7
UBR1Q8IWV7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC25.67■■□□□ 1.7
UBR1Q8IWV7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC25.67■■□□□ 1.7
UBR1Q8IWV7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC25.67■■□□□ 1.7
UBR1Q8IWV7 COX20P2-201ENST00000452636 358 ntBASIC25.67■■□□□ 1.7
UBR1Q8IWV7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC25.67■■□□□ 1.7
UBR1Q8IWV7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC25.67■■□□□ 1.7
UBR1Q8IWV7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms