Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 AC093010.1-201ENST00000473625 1624 ntBASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 SLC25A3P1-201ENST00000443844 931 ntBASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 REXO1L9P-201ENST00000604264 2108 ntBASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 AC097493.4-201ENST00000641197 219 ntBASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 AC008764.6-201ENST00000595909 2069 ntBASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST2H3AQ71DI3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 AC092865.7-201ENST00000641832 219 ntBASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST2H3AQ71DI3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 AC099343.3-201ENST00000605834 2503 ntBASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST2H3AQ71DI3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms