Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CASC1Q6TDU7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CASC1Q6TDU7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CASC1Q6TDU7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CASC1Q6TDU7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CASC1Q6TDU7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 AC007663.1-201ENST00000438948 1240 ntBASIC22.25■■□□□ 1.15
CASC1Q6TDU7 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.25■■□□□ 1.15
CASC1Q6TDU7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 MNT-208ENST00000575394 606 ntTSL 4 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 MIR3180-4-201ENST00000582223 153 ntBASIC22.25■■□□□ 1.15
CASC1Q6TDU7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CASC1Q6TDU7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 GRAMD4P1-201ENST00000435181 1110 ntBASIC22.24■■□□□ 1.15
CASC1Q6TDU7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 AC104390.1-201ENST00000555663 520 ntBASIC22.24■■□□□ 1.15
CASC1Q6TDU7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CASC1Q6TDU7 AC134043.2-201ENST00000624206 2238 ntBASIC22.23■■□□□ 1.15
CASC1Q6TDU7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 MMP23A-201ENST00000234610 1017 ntBASIC22.23■■□□□ 1.15
CASC1Q6TDU7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 AC128688.1-201ENST00000487626 519 ntBASIC22.23■■□□□ 1.15
CASC1Q6TDU7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CASC1Q6TDU7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CASC1Q6TDU7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CASC1Q6TDU7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.22■■□□□ 1.15
CASC1Q6TDU7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CASC1Q6TDU7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms