Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 LINC00602-201ENST00000629776 2065 ntBASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC62Q6P9F0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC62Q6P9F0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC62Q6P9F0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC62Q6P9F0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
CCDC62Q6P9F0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CCDC62Q6P9F0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC62Q6P9F0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CCDC62Q6P9F0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CCDC62Q6P9F0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 TP73-AS1-210ENST00000637775 1455 ntBASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 AC132008.2-207ENST00000454517 770 ntBASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 AL020996.1-203ENST00000536896 2307 ntBASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 ANO7L1-203ENST00000602586 1720 ntBASIC20.39■□□□□ 0.85
CCDC62Q6P9F0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 AC005082.1-201ENST00000413042 2259 ntBASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 AL138831.2-201ENST00000606564 490 ntBASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC62Q6P9F0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC62Q6P9F0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms