Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF549Q6P9A3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 GCSHP2-201ENST00000560971 527 ntBASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 AL157888.1-201ENST00000631930 593 ntBASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 AC133561.5-201ENST00000635547 218 ntBASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF549Q6P9A3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 AC097493.4-201ENST00000641197 219 ntBASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ZNF549Q6P9A3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF549Q6P9A3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms