Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MRPL54Q6P161 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 AC124283.5-201ENST00000624661 1809 ntBASIC13.76□□□□□ -0.21
MRPL54Q6P161 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 AL096828.2-201ENST00000567259 1965 ntBASIC13.76□□□□□ -0.21
MRPL54Q6P161 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MRPL54Q6P161 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MRPL54Q6P161 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.75□□□□□ -0.21
MRPL54Q6P161 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MRPL54Q6P161 AC068418.2-201ENST00000577309 3703 ntBASIC13.75□□□□□ -0.21
MRPL54Q6P161 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
MRPL54Q6P161 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
MRPL54Q6P161 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.74□□□□□ -0.21
MRPL54Q6P161 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
MRPL54Q6P161 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
MRPL54Q6P161 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
MRPL54Q6P161 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
MRPL54Q6P161 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms