Protein–RNA interactions for Protein: Q5JSP0

FGD3, FYVE, RhoGEF and PH domain-containing protein 3, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3Q5JSP0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 RCC2P3-201ENST00000418112 1537 ntBASIC17.11■□□□□ 0.33
FGD3Q5JSP0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FGD3Q5JSP0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 NKILA-202ENST00000614771 2598 ntBASIC17.1■□□□□ 0.33
FGD3Q5JSP0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 NIFKP9-201ENST00000419265 221 ntBASIC17.1■□□□□ 0.33
FGD3Q5JSP0 AC004980.1-204ENST00000429707 299 ntBASIC17.1■□□□□ 0.33
FGD3Q5JSP0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.1■□□□□ 0.33
FGD3Q5JSP0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.1■□□□□ 0.33
FGD3Q5JSP0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 AC091390.4-202ENST00000476426 537 ntBASIC17.09■□□□□ 0.33
FGD3Q5JSP0 AP002982.1-201ENST00000492365 877 ntBASIC17.09■□□□□ 0.33
FGD3Q5JSP0 AC090192.1-201ENST00000517740 490 ntBASIC17.09■□□□□ 0.33
FGD3Q5JSP0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FGD3Q5JSP0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
FGD3Q5JSP0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FGD3Q5JSP0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
FGD3Q5JSP0 CICP6-201ENST00000457191 2729 ntBASIC17.08■□□□□ 0.33
FGD3Q5JSP0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FGD3Q5JSP0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.08■□□□□ 0.33
FGD3Q5JSP0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
FGD3Q5JSP0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FGD3Q5JSP0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
FGD3Q5JSP0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FGD3Q5JSP0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FGD3Q5JSP0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.08■□□□□ 0.33
FGD3Q5JSP0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
FGD3Q5JSP0 AC093677.2-201ENST00000600169 1863 ntBASIC17.08■□□□□ 0.33
FGD3Q5JSP0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
FGD3Q5JSP0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
FGD3Q5JSP0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
FGD3Q5JSP0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.08■□□□□ 0.32
FGD3Q5JSP0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms