Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 AC009113.1-201ENST00000570267 2443 ntBASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 AC093677.2-201ENST00000600169 1863 ntBASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 AC005332.1-201ENST00000577698 1310 ntBASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01556Q5JQF7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 AC093010.1-201ENST00000473625 1624 ntBASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 PHGDH-209ENST00000641074 1780 ntBASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 PCED1CP-201ENST00000419887 785 ntBASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 AC005332.3-201ENST00000589904 676 ntBASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 AC011498.5-201ENST00000592027 486 ntBASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 AP000550.4-202ENST00000639755 178 ntBASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LINC01556Q5JQF7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC12.33□□□□□ -0.43
LINC01556Q5JQF7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
LINC01556Q5JQF7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
LINC01556Q5JQF7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
LINC01556Q5JQF7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01556Q5JQF7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01556Q5JQF7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01556Q5JQF7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LINC01556Q5JQF7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01556Q5JQF7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
LINC01556Q5JQF7 IER3-202ENST00000376377 1350 ntBASIC12.33□□□□□ -0.44
LINC01556Q5JQF7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms