Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC178Q5BJE1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC178Q5BJE1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC178Q5BJE1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 AC093677.2-201ENST00000600169 1863 ntBASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 AP002414.4-201ENST00000589764 1148 ntBASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 AC092329.2-201ENST00000598402 547 ntBASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 BCL2-203ENST00000589955 5011 ntBASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC178Q5BJE1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 AC246785.2-201ENST00000432512 513 ntBASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 VENTXP7-201ENST00000475503 772 ntBASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 DUTP2-201ENST00000519164 463 ntBASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 MIR3180-1-201ENST00000580374 94 ntBASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 MIR3180-3-201ENST00000584616 94 ntBASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC178Q5BJE1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 AC068472.1-201ENST00000474589 881 ntBASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 AL353801.3-201ENST00000609898 542 ntBASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC178Q5BJE1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 TPSP2-201ENST00000561760 610 ntBASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 AC011840.4-201ENST00000578471 627 ntBASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 AC022898.2-201ENST00000616822 1312 ntBASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC178Q5BJE1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms