Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 KRT89P-201ENST00000620027 1478 ntBASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 AC113404.2-201ENST00000507884 177 ntBASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 AC008687.5-201ENST00000593746 558 ntBASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 LINC01311-201ENST00000565162 1445 ntBASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 AC008764.6-201ENST00000595909 2069 ntBASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PTPN20Q4JDL3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 LINC00602-201ENST00000629776 2065 ntBASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 NOC2LP2-201ENST00000407594 1944 ntBASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 MIR662-201ENST00000384847 95 ntBASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 AL671277.2-201ENST00000458060 996 ntBASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTPN20Q4JDL3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 KRT18P48-201ENST00000434763 852 ntBASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.11■□□□□ 0.65
PTPN20Q4JDL3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms