Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 RCC2P3-201ENST00000418112 1537 ntBASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 ANO7L1-203ENST00000602586 1720 ntBASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 AC020763.4-201ENST00000623414 4170 ntBASIC21.11■□□□□ 0.97
CCDC144BQ3MJ40 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 AC020916.1-201ENST00000587762 1774 ntBASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 KRT18P1-202ENST00000452408 1331 ntBASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 AC004870.1-201ENST00000315132 882 ntBASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 KRT18P23-201ENST00000435622 1283 ntBASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 NUS1P1-201ENST00000446295 882 ntBASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC144BQ3MJ40 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 FDX1P1-201ENST00000449115 551 ntBASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC144BQ3MJ40 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.08■□□□□ 0.97
CCDC144BQ3MJ40 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC144BQ3MJ40 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.96
CCDC144BQ3MJ40 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC144BQ3MJ40 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC144BQ3MJ40 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC144BQ3MJ40 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC144BQ3MJ40 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms