Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 NIFKP9-201ENST00000419265 221 ntBASIC16.94■□□□□ 0.3
RFX4Q33E94 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
RFX4Q33E94 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX4Q33E94 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX4Q33E94 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX4Q33E94 RN7SL471P-201ENST00000580476 299 ntBASIC16.94■□□□□ 0.3
RFX4Q33E94 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX4Q33E94 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX4Q33E94 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.94■□□□□ 0.3
RFX4Q33E94 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFX4Q33E94 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RFX4Q33E94 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RFX4Q33E94 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RFX4Q33E94 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX4Q33E94 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 PP12613-201ENST00000424958 2230 ntBASIC16.93■□□□□ 0.3
RFX4Q33E94 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX4Q33E94 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RFX4Q33E94 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.93■□□□□ 0.3
RFX4Q33E94 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 ESRRAP1-201ENST00000400596 1257 ntBASIC16.93■□□□□ 0.3
RFX4Q33E94 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.93■□□□□ 0.3
RFX4Q33E94 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RFX4Q33E94 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RFX4Q33E94 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RFX4Q33E94 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RFX4Q33E94 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RFX4Q33E94 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RFX4Q33E94 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.93■□□□□ 0.3
RFX4Q33E94 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RFX4Q33E94 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RFX4Q33E94 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.93■□□□□ 0.3
RFX4Q33E94 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RFX4Q33E94 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RFX4Q33E94 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.92■□□□□ 0.3
RFX4Q33E94 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
RFX4Q33E94 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.92■□□□□ 0.3
RFX4Q33E94 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.92■□□□□ 0.3
RFX4Q33E94 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 AL353708.3-201ENST00000610272 989 ntBASIC16.92■□□□□ 0.3
RFX4Q33E94 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RFX4Q33E94 OR6D1P-203ENST00000641209 4860 ntBASIC16.92■□□□□ 0.3
RFX4Q33E94 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.92■□□□□ 0.3
RFX4Q33E94 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.92■□□□□ 0.3
RFX4Q33E94 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RFX4Q33E94 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RFX4Q33E94 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.91■□□□□ 0.3
RFX4Q33E94 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
RFX4Q33E94 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 KRT18P55-202ENST00000578578 1546 ntBASIC16.91■□□□□ 0.3
RFX4Q33E94 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.91■□□□□ 0.3
RFX4Q33E94 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms