Protein–RNA interactions for Protein: Q2VWP7

PRTG, Protogenin, humanhuman

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTGQ2VWP7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRTGQ2VWP7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PRTGQ2VWP7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRTGQ2VWP7 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.16■□□□□ 0.34
PRTGQ2VWP7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRTGQ2VWP7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRTGQ2VWP7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
PRTGQ2VWP7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 MTCL1P1-201ENST00000446207 792 ntBASIC17.15■□□□□ 0.34
PRTGQ2VWP7 CLEC4GP1-201ENST00000596555 870 ntBASIC17.15■□□□□ 0.34
PRTGQ2VWP7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.15■□□□□ 0.34
PRTGQ2VWP7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 AL096828.2-201ENST00000567259 1965 ntBASIC17.15■□□□□ 0.34
PRTGQ2VWP7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.15■□□□□ 0.34
PRTGQ2VWP7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.14■□□□□ 0.34
PRTGQ2VWP7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.14■□□□□ 0.34
PRTGQ2VWP7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 AC091607.1-201ENST00000490318 1060 ntBASIC17.14■□□□□ 0.33
PRTGQ2VWP7 DUTP2-201ENST00000519164 463 ntBASIC17.14■□□□□ 0.33
PRTGQ2VWP7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 AC011840.4-201ENST00000578471 627 ntBASIC17.14■□□□□ 0.33
PRTGQ2VWP7 AP005901.3-202ENST00000581653 237 ntBASIC17.14■□□□□ 0.33
PRTGQ2VWP7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 AC104581.1-202ENST00000635932 2618 ntBASIC17.14■□□□□ 0.33
PRTGQ2VWP7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PRTGQ2VWP7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.13■□□□□ 0.33
PRTGQ2VWP7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 AP000867.3-201ENST00000524675 377 ntBASIC17.13■□□□□ 0.33
PRTGQ2VWP7 AC012615.1-201ENST00000565797 1299 ntBASIC17.13■□□□□ 0.33
PRTGQ2VWP7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 MIR3652-201ENST00000579335 131 ntBASIC17.13■□□□□ 0.33
PRTGQ2VWP7 Z69720.1-201ENST00000601483 472 ntBASIC17.13■□□□□ 0.33
PRTGQ2VWP7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.13■□□□□ 0.33
PRTGQ2VWP7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms