Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH17Q12864 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.39■□□□□ 0.53
CDH17Q12864 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.39■□□□□ 0.53
CDH17Q12864 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.39■□□□□ 0.53
CDH17Q12864 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH17Q12864 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.39■□□□□ 0.53
CDH17Q12864 AC008687.5-201ENST00000593746 558 ntBASIC18.39■□□□□ 0.53
CDH17Q12864 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.39■□□□□ 0.53
CDH17Q12864 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CDH17Q12864 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDH17Q12864 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDH17Q12864 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.39■□□□□ 0.53
CDH17Q12864 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH17Q12864 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDH17Q12864 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 AC067852.2-201ENST00000590513 2313 ntBASIC18.38■□□□□ 0.53
CDH17Q12864 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
CDH17Q12864 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH17Q12864 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH17Q12864 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CDH17Q12864 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDH17Q12864 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH17Q12864 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDH17Q12864 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH17Q12864 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH17Q12864 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH17Q12864 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDH17Q12864 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH17Q12864 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDH17Q12864 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 PVRIG2P-201ENST00000435460 978 ntBASIC18.37■□□□□ 0.53
CDH17Q12864 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH17Q12864 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDH17Q12864 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.37■□□□□ 0.53
CDH17Q12864 AL157888.1-201ENST00000631930 593 ntBASIC18.37■□□□□ 0.53
CDH17Q12864 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH17Q12864 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CDH17Q12864 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH17Q12864 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDH17Q12864 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH17Q12864 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH17Q12864 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH17Q12864 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 GNAS-203ENST00000306120 1878 ntBASIC18.36■□□□□ 0.53
CDH17Q12864 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH17Q12864 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CDH17Q12864 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.36■□□□□ 0.53
CDH17Q12864 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
CDH17Q12864 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CDH17Q12864 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH17Q12864 LIN28AP1-201ENST00000429574 405 ntBASIC18.36■□□□□ 0.53
CDH17Q12864 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH17Q12864 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms