Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAE1P78406 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAE1P78406 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RAE1P78406 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAE1P78406 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.26■□□□□ 0.35
RAE1P78406 DUTP2-201ENST00000519164 463 ntBASIC17.26■□□□□ 0.35
RAE1P78406 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAE1P78406 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.26■□□□□ 0.35
RAE1P78406 AC133561.5-201ENST00000635547 218 ntBASIC17.26■□□□□ 0.35
RAE1P78406 AC097493.4-201ENST00000641197 219 ntBASIC17.26■□□□□ 0.35
RAE1P78406 LINC00167-201ENST00000530583 1419 ntBASIC17.26■□□□□ 0.35
RAE1P78406 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RAE1P78406 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAE1P78406 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RAE1P78406 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RAE1P78406 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.26■□□□□ 0.35
RAE1P78406 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAE1P78406 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.25■□□□□ 0.35
RAE1P78406 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.25■□□□□ 0.35
RAE1P78406 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.25■□□□□ 0.35
RAE1P78406 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RAE1P78406 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RAE1P78406 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.25■□□□□ 0.35
RAE1P78406 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RAE1P78406 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.25■□□□□ 0.35
RAE1P78406 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 AL441883.1-201ENST00000566170 1045 ntBASIC17.25■□□□□ 0.35
RAE1P78406 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 AC079602.3-201ENST00000623931 403 ntBASIC17.25■□□□□ 0.35
RAE1P78406 AC073912.3-201ENST00000624414 853 ntBASIC17.25■□□□□ 0.35
RAE1P78406 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.25■□□□□ 0.35
RAE1P78406 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.25■□□□□ 0.35
RAE1P78406 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.25■□□□□ 0.35
RAE1P78406 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.25■□□□□ 0.35
RAE1P78406 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RAE1P78406 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAE1P78406 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAE1P78406 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
RAE1P78406 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.24■□□□□ 0.35
RAE1P78406 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.24■□□□□ 0.35
RAE1P78406 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.24■□□□□ 0.35
RAE1P78406 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.24■□□□□ 0.35
RAE1P78406 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.24■□□□□ 0.35
RAE1P78406 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.24■□□□□ 0.35
RAE1P78406 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.24■□□□□ 0.35
RAE1P78406 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.24■□□□□ 0.35
RAE1P78406 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RAE1P78406 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.24■□□□□ 0.35
RAE1P78406 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
RAE1P78406 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
RAE1P78406 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RAE1P78406 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAE1P78406 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RAE1P78406 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RAE1P78406 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.24■□□□□ 0.35
RAE1P78406 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RAE1P78406 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RAE1P78406 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAE1P78406 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAE1P78406 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.23■□□□□ 0.35
RAE1P78406 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAE1P78406 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms