Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC42P60953 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC42P60953 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDC42P60953 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDC42P60953 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC42P60953 AC106820.2-201ENST00000563775 3264 ntBASIC16.65■□□□□ 0.26
CDC42P60953 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42P60953 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC42P60953 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.65■□□□□ 0.26
CDC42P60953 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 KRT16P5-201ENST00000455284 522 ntBASIC16.65■□□□□ 0.26
CDC42P60953 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC42P60953 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42P60953 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42P60953 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CDC42P60953 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CDC42P60953 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CDC42P60953 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDC42P60953 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CDC42P60953 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDC42P60953 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42P60953 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42P60953 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42P60953 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42P60953 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.64■□□□□ 0.25
CDC42P60953 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.64■□□□□ 0.25
CDC42P60953 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42P60953 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.64■□□□□ 0.25
CDC42P60953 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.64■□□□□ 0.25
CDC42P60953 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.64■□□□□ 0.25
CDC42P60953 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 KRT18P55-202ENST00000578578 1546 ntBASIC16.64■□□□□ 0.25
CDC42P60953 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42P60953 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CDC42P60953 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42P60953 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42P60953 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42P60953 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CDC42P60953 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDC42P60953 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.63■□□□□ 0.25
CDC42P60953 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42P60953 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42P60953 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDC42P60953 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.63■□□□□ 0.25
CDC42P60953 AC084018.2-201ENST00000613093 2607 ntBASIC16.63■□□□□ 0.25
CDC42P60953 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.63■□□□□ 0.25
CDC42P60953 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CDC42P60953 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42P60953 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42P60953 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CDC42P60953 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.63■□□□□ 0.25
CDC42P60953 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.63■□□□□ 0.25
CDC42P60953 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.63■□□□□ 0.25
CDC42P60953 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42P60953 AC004980.1-204ENST00000429707 299 ntBASIC16.63■□□□□ 0.25
CDC42P60953 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.63■□□□□ 0.25
CDC42P60953 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDC42P60953 AC091390.4-202ENST00000476426 537 ntBASIC16.63■□□□□ 0.25
CDC42P60953 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CDC42P60953 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.63■□□□□ 0.25
CDC42P60953 AC092666.2-201ENST00000613287 246 ntBASIC16.63■□□□□ 0.25
CDC42P60953 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.63■□□□□ 0.25
CDC42P60953 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42P60953 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDC42P60953 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms