Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.72□□□□□ -0.21
HIST1H2BDP58876 AC112777.1-201ENST00000540175 1423 ntBASIC13.72□□□□□ -0.21
HIST1H2BDP58876 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H2BDP58876 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST1H2BDP58876 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H2BDP58876 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H2BDP58876 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H2BDP58876 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H2BDP58876 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H2BDP58876 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H2BDP58876 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H2BDP58876 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H2BDP58876 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H2BDP58876 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.71□□□□□ -0.22
HIST1H2BDP58876 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST1H2BDP58876 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 AC126177.1-201ENST00000547829 2218 ntBASIC13.7□□□□□ -0.22
HIST1H2BDP58876 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 PTCHD3P2-201ENST00000424937 1205 ntBASIC13.7□□□□□ -0.22
HIST1H2BDP58876 AC105265.2-201ENST00000467189 838 ntBASIC13.7□□□□□ -0.22
HIST1H2BDP58876 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H2BDP58876 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H2BDP58876 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H2BDP58876 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST1H2BDP58876 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms