Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
FAM3BP58499 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FAM3BP58499 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FAM3BP58499 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
FAM3BP58499 REXO1L9P-201ENST00000604264 2108 ntBASIC14.2□□□□□ -0.14
FAM3BP58499 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FAM3BP58499 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FAM3BP58499 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FAM3BP58499 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.19□□□□□ -0.14
FAM3BP58499 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
FAM3BP58499 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
FAM3BP58499 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
FAM3BP58499 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
FAM3BP58499 KRT18P29-201ENST00000397031 1267 ntBASIC14.19□□□□□ -0.14
FAM3BP58499 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
FAM3BP58499 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.19□□□□□ -0.14
FAM3BP58499 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
FAM3BP58499 CYP2T3P-201ENST00000601990 817 ntBASIC14.19□□□□□ -0.14
FAM3BP58499 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
FAM3BP58499 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
FAM3BP58499 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
FAM3BP58499 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.19□□□□□ -0.14
FAM3BP58499 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
FAM3BP58499 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
FAM3BP58499 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
FAM3BP58499 AC093677.2-201ENST00000600169 1863 ntBASIC14.18□□□□□ -0.14
FAM3BP58499 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FAM3BP58499 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
FAM3BP58499 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.18□□□□□ -0.14
FAM3BP58499 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
FAM3BP58499 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 PCDHB19P-201ENST00000570871 2371 ntBASIC14.18□□□□□ -0.14
FAM3BP58499 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.18□□□□□ -0.14
FAM3BP58499 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
FAM3BP58499 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
FAM3BP58499 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
FAM3BP58499 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
FAM3BP58499 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.18□□□□□ -0.14
FAM3BP58499 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.18□□□□□ -0.14
FAM3BP58499 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.18□□□□□ -0.14
FAM3BP58499 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.18□□□□□ -0.14
FAM3BP58499 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.18□□□□□ -0.14
FAM3BP58499 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 AC083880.1-201ENST00000608266 535 ntBASIC14.18□□□□□ -0.14
FAM3BP58499 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.18□□□□□ -0.14
FAM3BP58499 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FAM3BP58499 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
FAM3BP58499 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FAM3BP58499 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
FAM3BP58499 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.18□□□□□ -0.14
FAM3BP58499 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.18□□□□□ -0.14
FAM3BP58499 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.18□□□□□ -0.14
FAM3BP58499 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FAM3BP58499 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.18□□□□□ -0.14
FAM3BP58499 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.17□□□□□ -0.14
FAM3BP58499 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 AL499627.1-201ENST00000569373 2188 ntBASIC14.17□□□□□ -0.14
FAM3BP58499 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.17□□□□□ -0.14
FAM3BP58499 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FAM3BP58499 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FAM3BP58499 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.17□□□□□ -0.14
FAM3BP58499 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.17□□□□□ -0.14
FAM3BP58499 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms